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Modify HDFArchive calls to 'r' where possible to handle corrupt files

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Priyanka Seth 2015-04-27 13:12:28 +02:00
parent b2c3d6ddf6
commit 79b4b426a8
4 changed files with 6 additions and 6 deletions
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4
python/sumk_dft.py
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@ -160,7 +160,7 @@ class SumkDFT:
subgroup_present = 0 subgroup_present = 0
if mpi.is_master_node(): if mpi.is_master_node():
ar = HDFArchive(self.hdf_file,'a') ar = HDFArchive(self.hdf_file,'r')
if subgrp in ar: if subgrp in ar:
subgroup_present = True subgroup_present = True
# first read the necessary things: # first read the necessary things:
@ -225,7 +225,7 @@ class SumkDFT:
""" """
if not (mpi.is_master_node()): return # do nothing on nodes if not (mpi.is_master_node()): return # do nothing on nodes
ar = HDFArchive(self.hdf_file,'a') ar = HDFArchive(self.hdf_file,'r')
if not subgrp in ar: mpi.report("Loading %s failed!"%subgrp) if not subgrp in ar: mpi.report("Loading %s failed!"%subgrp)
list_to_return = [] list_to_return = []
for it in things_to_load: for it in things_to_load:

2
python/sumk_dft_tools.py
View File

@ -598,7 +598,7 @@ class SumkDFTTools(SumkDFT):
# Check if wien converter was called and read transport subgroup form hdf file # Check if wien converter was called and read transport subgroup form hdf file
if mpi.is_master_node(): if mpi.is_master_node():
ar = HDFArchive(self.hdf_file, 'a') ar = HDFArchive(self.hdf_file, 'r')
if not (self.transp_data in ar): raise IOError, "transport_distribution: No %s subgroup in hdf file found! Call convert_transp_input first." %self.transp_data if not (self.transp_data in ar): raise IOError, "transport_distribution: No %s subgroup in hdf file found! Call convert_transp_input first." %self.transp_data
self.read_transport_input_from_hdf() self.read_transport_input_from_hdf()

2
python/symmetry.py
View File

@ -53,7 +53,7 @@ class Symmetry:
if mpi.is_master_node(): if mpi.is_master_node():
#Read the stuff on master: #Read the stuff on master:
ar = HDFArchive(hdf_file,'a') ar = HDFArchive(hdf_file,'r')
if subgroup is None: if subgroup is None:
ar2 = ar ar2 = ar
else: else: