.NOPARALLEL:

INCLUDE_DIRS=Nuclei,Utils,Basis,SCF
LIBS=
PKGS=
OCAMLBUILD=ocamlbuild -j 0 -cflags $(ocamlcflags) -lflags $(ocamlcflags) $(ocamldocflags) -Is $(INCLUDE_DIRS) -ocamlopt $(ocamloptflags)

MLLFILES=$(wildcard */*.mll) $(wildcard *.mll) Utils/math_functions.c
MLYFILES=$(wildcard */*.mly) $(wildcard *.mly) 
MLFILES= $(wildcard */*.ml)  $(wildcard *.ml) 
MLIFILES=$(wildcard */*.mli) $(wildcard *.mli) 

ALL_NATIVE=$(patsubst %.ml,%.native,$(wildcard run_*.ml)) 
ALL_BYTE=$(patsubst %.ml,%.byte,$(wildcard run_*.ml)) 
ALL_EXE=$(ALL_BYTE) $(ALL_NATIVE)

.PHONY: default doc

default: $(ALL_EXE) doc

tests: run_tests.native

QCaml.odocl: $(MLIFILES)
	ls $(MLIFILES) | sed "s/\.mli//" > QCaml.odocl

doc: QCaml.odocl
	$(OCAMLBUILD) QCaml.docdir/index.html -use-ocamlfind  $(PKGS)  

%.inferred.mli: $(MLFILES)
	$(OCAMLBUILD) $*.inferred.mli -use-ocamlfind  $(PKGS) 
	mv _build/$*.inferred.mli .

%.byte: $(MLFILES) $(MLIFILES) $(MLLFILES) $(MLYFILES)
	rm -f -- $*
	$(OCAMLBUILD) $*.byte  -use-ocamlfind  $(PKGS) 

%.native: $(MLFILES) $(MLIFILES) $(MLLFILES) $(MLYFILES) 
	rm -f -- $*
	$(OCAMLBUILD) $*.native -use-ocamlfind $(PKGS)
	ln -s $*.native $*

%.p.native: $(MLFILES) $(MLIFILES) $(MLLFILES) $(MLYFILES) 
	rm -f -- $*
	$(OCAMLBUILD) $*.p.native -use-ocamlfind $(PKGS)

%.p.byte: $(MLFILES) $(MLIFILES) $(MLLFILES) $(MLYFILES) 
	rm -f -- $*
	$(OCAMLBUILD) -ocamlc ocamlcp $*.byte -use-ocamlfind $(PKGS)

clean: 
	$(OCAMLBUILD) -clean # rm -rf _build $(ALL_EXE) *.native *.byte

debug: run_integrals.native
	./debug.sh

install: $(ALL_NATIVE) 
	cp run_hartree_fock.native $(bin)/run_hartree_fock

uninstall:
	rm -f $(bin)/run_hartree_fock