Added Landmark profiler

ao/README.org

@@ -68,6 +68,7 @@ with open(dunetest,'w') as f:
  qcaml.gaussian_integrals
  qcaml.operators
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

common/README.org

@@ -64,6 +64,7 @@ with open(dunetest,'w') as f:
  getopt
  unix
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

common/lib/dune

@@ -13,11 +13,10 @@
   unix
   )
 
-  (c_names
+  (foreign_stubs
-     util
+   (language c)
-  )
+   (flags (:standard) -Ofast -mtune=native -fPIC)
-  (c_flags (:standard)
+   (names util)
-    -Ofast -mtune=native -fPIC
   )
 )
 

dune-project

@@ -1,4 +1,4 @@
-(lang dune 1.10)
+(lang dune 2.7)
 (name qcaml)
 
 (generate_opam_files true)
@@ -34,6 +34,7 @@ in quantum chemistry.")
     zarith
     alcotest
     domainslib
+    (landmarks-ppx (and :dev (>= 1.4)))
   )
 )
 

examples/dune

@@ -3,9 +3,13 @@
         ex_integrals
         ex_hartree_fock
         ex_localization
-)
+  )
-(libraries
+  (libraries
   qcaml
   unix
-))
+  landmarks
+  )
+  (instrumentation (backend landmarks-threads))
+)
+
 

gaussian/README.org

@@ -55,6 +55,7 @@ with open(dunetest,'w') as f:
    #+end_src
 
 ** Dependencies
+ (instrumentation (backend landmarks))
 
    #+name: dependencies
    #+begin_src elisp
@@ -62,6 +63,7 @@ with open(dunetest,'w') as f:
  qcaml.common
  qcaml.particles
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

gaussian/lib/dune

@@ -9,6 +9,7 @@
   qcaml.common
   qcaml.particles
   )
+  (instrumentation (backend landmarks))
  
  
 )

gaussian_integrals/README.org

@@ -67,6 +67,7 @@ with open(dunetest,'w') as f:
  qcaml.gaussian
  qcaml.operators
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

gaussian_integrals/lib/dune

@@ -12,8 +12,9 @@
   qcaml.operators
   unix
   domainslib
-  )
+  landmarks
+ )
+ (instrumentation (backend landmarks))
  (modules_without_implementation matrix_on_basis)
-
 )
 

linear_algebra/README.org

@@ -62,6 +62,7 @@ with open(dunetest,'w') as f:
  qcaml.common
  lacaml
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

mo/README.org

@@ -61,6 +61,7 @@ with open(dunetest,'w') as f:
 (libraries
  qcaml.simulation
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

operators/README.org

@@ -61,6 +61,7 @@ with open(dunetest,'w') as f:
 (libraries
  qcaml.common
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

particles/README.org

@@ -63,6 +63,7 @@ with open(dunetest,'w') as f:
  trexio
  qcaml.common
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

perturbation/README.org

@@ -62,6 +62,7 @@ with open(dunetest,'w') as f:
  qcaml.simulation
  qcaml.mo
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

qcaml.opam

@@ -1,25 +1,18 @@
 # This file is generated by dune, edit dune-project instead
 opam-version: "2.0"
-build: [
-  ["dune" "subst"] {pinned}
-  ["dune" "build" "-p" name "-j" jobs]
-  ["dune" "runtest" "-p" name "-j" jobs] {with-test}
-  ["dune" "build" "-p" name "@doc"] {with-doc}
-]
-maintainer: ["Anthony Scemama <scemama@irsamc.ups-tlse.fr>"]
-authors: ["Anthony Scemama <scemama@irsamc.ups-tlse.fr>"]
-bug-reports: "https://gitlab.com/scemama/qcaml/issues"
-homepage: "https://gitlab.com/scemama/qcaml"
-doc: "https://gitlab.com/scemama/qcaml"
-license: "LGPL-2.1+ with OCaml linking exception"
-dev-repo: "git+https://gitlab.com/scemama/qcaml.git"
 synopsis: "QCaml - Quantum chemistry with OCaml"
 description: """
 QCaml provides a programming framewrok work wave function methods
 in quantum chemistry."""
+maintainer: ["Anthony Scemama <scemama@irsamc.ups-tlse.fr>"]
+authors: ["Anthony Scemama <scemama@irsamc.ups-tlse.fr>"]
+license: "LGPL-2.1+ with OCaml linking exception"
+homepage: "https://gitlab.com/scemama/qcaml"
+doc: "https://gitlab.com/scemama/qcaml"
+bug-reports: "https://gitlab.com/scemama/qcaml/issues"
 depends: [
   "ocaml" {>= "5.0"}
-  "dune" {>= "1.10"}
+  "dune" {>= "2.7" & >= "1.10"}
   "camlp-streams" {>= "5.0"}
   "trexio"
   "lacaml"
@@ -27,4 +20,21 @@ depends: [
   "zarith"
   "alcotest"
   "domainslib"
+  "landmarks-ppx" {dev & >= "1.4"}
+  "odoc" {with-doc}
 ]
+build: [
+  ["dune" "subst"] {dev}
+  [
+    "dune"
+    "build"
+    "-p"
+    name
+    "-j"
+    jobs
+    "@install"
+    "@runtest" {with-test}
+    "@doc" {with-doc}
+  ]
+]
+dev-repo: "git+https://gitlab.com/scemama/qcaml.git"

qcaml/README.org

@@ -42,6 +42,7 @@ with open(dune,'w') as f:
  (libraries
  {dependencies}
  )
+ (instrumentation (backend landmarks))
  <<noimplementation>>
  <<c-files>>
 )

simulation/README.org

@@ -66,6 +66,7 @@ with open(dunetest,'w') as f:
  qcaml.operators
  qcaml.ao
  )
+ (instrumentation (backend landmarks))
    #+end_src
 
 ** Modules without implementation

test/dune

@@ -12,8 +12,8 @@
   test_perturbation
 ))
 
-(alias
+(rule
- (name runtest)
+ (alias runtest)
  (deps run_tests.exe)
  (action (run %{deps} -q --color=always)))
 

top/README.org

@@ -37,6 +37,7 @@ with open("lib/dune",'w') as f:
   compiler-libs.toplevel
   qcaml
  )
+ (instrumentation (backend landmarks))
 )
 """)
    #+end_src