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QCaml/Basis/TwoElectronRRVectorized.ml

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open Util
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open Lacaml.D
open Bigarray
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open Powers
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open Coordinate
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let cutoff = Constants.cutoff
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let cutoff2 = cutoff *. cutoff
exception NullQuartet
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exception Found
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let at_least_one_valid arr =
try
Array.iter (fun x -> if (abs_float x > cutoff) then raise Found) arr ; false
with Found -> true
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(** Horizontal and Vertical Recurrence Relations (HVRR) *)
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let hvrr_two_e_vector (angMom_a, angMom_b, angMom_c, angMom_d)
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zero_m_array
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(expo_b, expo_d)
(expo_inv_p, expo_inv_q)
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(center_ab, center_cd, center_pq)
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map_1d map_2d np nq
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=
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let get_xyz angMom =
match angMom with
| { y=0 ; z=0 ; _ } -> X
| { z=0 ; _ } -> Y
| _ -> Z
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in
(** Vertical recurrence relations *)
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let rec vrr0_v m angMom_a =
match angMom_a.tot with
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| 0 -> Some zero_m_array.(m)
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| _ ->
let key = Zkey.of_powers (Zkey.Three angMom_a)
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in
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try Zmap.find map_1d.(m) key with
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| Not_found ->
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let result =
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let xyz = get_xyz angMom_a in
let am = Powers.decr xyz angMom_a in
let amxyz = Powers.get xyz am in
if amxyz >= 0 then
begin
let cab = Coordinate.get xyz center_ab in
let v1_top, p1_top =
if abs_float cab < cutoff then
None,
vrr0_v (m+1) am
else
vrr0_v m am, vrr0_v (m+1) am
in
let v1_top2, p1_top2 =
if amxyz < 1 then None, None else
let amm = Powers.decr xyz am in
vrr0_v m amm, vrr0_v (m+1) amm
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in
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let result = Array.make_matrix np nq 0. in
let p0 =
match p1_top with
| Some p1_top -> p1_top
| _ -> assert false
in
begin
match v1_top with
| None -> ()
| Some v0 ->
Array.iteri (fun l result_l ->
let f0 = -. expo_b.(l) *. expo_inv_p.(l) *. cab
and v0_l = v0.(l)
in
Array.iteri (fun k v0_lk ->
result_l.(k) <- v0_lk *. f0) v0_l ) result
end;
let amxyz = Powers.get xyz am in
if amxyz < 1 then
Array.iteri (fun l result_l ->
let expo_inv_p_l = expo_inv_p.(l)
and center_pq_xyz_l = (center_pq xyz).(l)
and result_l = result.(l)
and p0_l = p0.(l)
in
Array.iteri (fun k p0_lk ->
result_l.(k) <- result_l.(k)
+. expo_inv_p_l *. center_pq_xyz_l.(k) *. p0_lk
) p0_l ) result
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else
begin
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let v1 =
match v1_top2 with
| Some v1_top2 -> v1_top2
| None -> assert false
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in
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let v2 =
match p1_top2 with
| Some p1_top2 -> p1_top2
| None -> assert false
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in
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Array.iteri (fun l result_l ->
let f = float_of_int amxyz *. expo_inv_p.(l) *. 0.5
and expo_inv_p_l = expo_inv_p.(l)
and center_pq_xyz_l = (center_pq xyz).(l)
and v1_l = v1.(l)
and v2_l = v2.(l)
and result_l = result.(l)
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in
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Array.iteri (fun k p0_lk ->
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result_l.(k) <- result_l.(k) +.
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expo_inv_p_l *. center_pq_xyz_l.(k) *. p0_lk +.
f *. (v1_l.(k) +. v2_l.(k) *. expo_inv_p_l)
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) p0.(l)
) result
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end;
Some result
end
else
None
in
Zmap.add map_1d.(m) key result;
result
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and vrr_v m angMom_a angMom_c =
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match (angMom_a.tot, angMom_c.tot) with
| (i,0) -> vrr0_v m angMom_a
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| (_,_) ->
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let key = Zkey.of_powers (Zkey.Six (angMom_a, angMom_c))
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in
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try Zmap.find map_2d.(m) key with
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| Not_found ->
let result =
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begin
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let xyz = get_xyz angMom_c in
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let cm = Powers.decr xyz angMom_c in
let axyz = Powers.get xyz angMom_a in
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let do_compute = ref false in
let v1 =
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let f = -. (Coordinate.get xyz center_cd) in
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let f1 =
Array.init nq (fun k ->
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let x = expo_d.(k) *. expo_inv_q.(k) *. f in
if ( (not !do_compute) && (abs_float x > cutoff) ) then
do_compute := true;
x)
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in
if (!do_compute) then
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match vrr_v m angMom_a cm with
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| None -> None
| Some v1 ->
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begin
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Some (Array.init np (fun l ->
let v1_l = v1.(l) in
Array.mapi (fun k f1k -> v1_l.(k) *. f1k) f1
) )
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end
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else None
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in
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let v2 =
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let f2 =
Array.init np (fun l ->
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let cpq_l = (center_pq xyz).(l) in
Array.init nq (fun k ->
let x = expo_inv_q.(k) *. cpq_l.(k) in
if (!do_compute) then x
else (if abs_float x > cutoff then do_compute := true ; x)
) )
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in
if (!do_compute) then
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match vrr_v (m+1) angMom_a cm with
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| None -> None
| Some v2 ->
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begin
for l=0 to np-1 do
let f2_l = f2.(l)
and v2_l = v2.(l)
in
for k=0 to nq-1 do
f2_l.(k) <- -. v2_l.(k) *. f2_l.(k)
done
done;
Some f2
end
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else
None
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in
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let p1 =
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match v1, v2 with
| None, None -> None
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| None, Some v2 -> Some v2
| Some v1, None -> Some v1
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| Some v1, Some v2 ->
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begin
for l=0 to np-1 do
let v1_l = v1.(l)
and v2_l = v2.(l)
in
for k=0 to nq-1 do
v2_l.(k) <- v2_l.(k) +. v1_l.(k)
done
done;
Some v2
end
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in
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let cxyz = Powers.get xyz angMom_c in
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let p2 =
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if cxyz < 2 then p1 else
let cmm = Powers.decr xyz cm in
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let fcm = (float_of_int (cxyz-1)) *. 0.5 in
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let f1 =
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Array.init nq (fun k ->
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let x = fcm *. expo_inv_q.(k) in
if (!do_compute) then x
else (if abs_float x > cutoff then do_compute := true ; x)
)
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in
let v1 =
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if (!do_compute) then
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match vrr_v m angMom_a cmm with
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| None -> None
| Some v1 ->
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begin
let result = Array.make_matrix np nq 0. in
for l=0 to np-1 do
let v1_l = v1.(l)
and result_l = result.(l)
in
for k=0 to nq-1 do
result_l.(k) <- v1_l.(k) *. f1.(k)
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done;
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done;
Some result
end
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else None
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in
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let v3 =
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let f2 =
Array.init nq (fun k ->
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let x = expo_inv_q.(k) *. f1.(k) in
if (!do_compute) then x
else (if abs_float x > cutoff then do_compute := true ; x)
)
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in
if (!do_compute) then
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match vrr_v (m+1) angMom_a cmm with
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| None -> None
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| Some v3 ->
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begin
let result = Array.make_matrix np nq 0. in
for l=0 to np-1 do
let v3_l = v3.(l)
and result_l = result.(l)
in
for k=0 to nq-1 do
result_l.(k) <- v3_l.(k) *. f2.(k)
done
done;
Some result
end
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else None
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in
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match p1, v1, v3 with
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| None, None, None -> None
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| Some p1, None, None -> Some p1
| None, Some v1, None -> Some v1
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| None, None, Some v3 -> Some v3
| Some p1, Some v1, Some v3 ->
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begin
for l=0 to np-1 do
let v3_l = v3.(l)
and v1_l = v1.(l)
and p1_l = p1.(l)
in
for k=0 to nq-1 do
v3_l.(k) <- p1_l.(k) +. v1_l.(k) +. v3_l.(k)
done
done;
Some v3
end
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| Some p1, Some v1, None ->
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begin
for l=0 to np-1 do
let v1_l = v1.(l)
and p1_l = p1.(l)
in
for k=0 to nq-1 do
p1_l.(k) <- v1_l.(k) +. p1_l.(k)
done
done;
Some p1
end
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| Some p1, None, Some v3 ->
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begin
for l=0 to np-1 do
let v3_l = v3.(l)
and p1_l = p1.(l)
in
for k=0 to nq-1 do
p1_l.(k) <- p1_l.(k) +. v3_l.(k)
done
done;
Some p1
end
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| None , Some v1, Some v3 ->
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begin
for l=0 to np-1 do
let v3_l = v3.(l)
and v1_l = v1.(l)
in
for k=0 to nq-1 do
v3_l.(k) <- v1_l.(k) +. v3_l.(k)
done
done;
Some v3
end
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in
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if (axyz < 1) || (cxyz < 1) then p2 else
let am = Powers.decr xyz angMom_a in
let v =
vrr_v (m+1) am cm
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in
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match (p2, v) with
| None, None -> None
| Some p2, None -> Some p2
| _, Some v ->
begin
let p2 =
match p2 with
| None -> Array.make_matrix np nq 0.
| Some p2 -> p2
in
for l=0 to np-1 do
let fa = (float_of_int axyz) *. expo_inv_p.(l) *. 0.5 in
let p2_l = p2.(l)
and v_l = v.(l)
in
for k=0 to nq-1 do
p2_l.(k) <- p2_l.(k) -. fa *. expo_inv_q.(k) *. v_l.(k)
done
done;
Some p2
end
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end
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in Zmap.add map_2d.(m) key result;
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result
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(** Horizontal recurrence relations *)
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and hrr0_v angMom_a angMom_b angMom_c =
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match angMom_b.tot with
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| 0 ->
begin
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match (angMom_a.tot, angMom_c.tot) with
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| (0,0) -> Array.fold_left (fun accu c ->
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accu +. Array.fold_left (+.) 0. c) 0. zero_m_array.(0)
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| (_,_) ->
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begin
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match vrr_v 0 angMom_a angMom_c with
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| Some matrix -> Array.fold_left (fun accu c -> accu +. Array.fold_left (+.) 0. c) 0. matrix
| None -> 0.
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end
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end
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| 1 ->
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let xyz = get_xyz angMom_b in
let ap = Powers.incr xyz angMom_a in
let f = Coordinate.get xyz center_ab in
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let v1 =
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match vrr_v 0 ap angMom_c with
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| Some matrix -> Array.fold_left (fun accu c -> accu +. Array.fold_left (+.) 0. c) 0. matrix
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| None -> 0.
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in
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if (abs_float f < cutoff) then v1 else
let v2 =
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match vrr_v 0 angMom_a angMom_c with
| Some matrix -> Array.fold_left (fun accu c -> accu +. Array.fold_left (+.) 0. c) 0. matrix
| None -> 0.
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in
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v1 +. v2 *. f
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| _ ->
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let xyz = get_xyz angMom_b in
let bxyz = Powers.get xyz angMom_b in
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if (bxyz < 0) then 0. else
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let ap = Powers.incr xyz angMom_a in
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let bm = Powers.decr xyz angMom_b in
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let h1 =
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hrr0_v ap bm angMom_c
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in
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let f = Coordinate.get xyz center_ab in
if abs_float f < cutoff then h1 else
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let h2 =
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hrr0_v angMom_a bm angMom_c
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in
h1 +. h2 *. f
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and hrr_v angMom_a angMom_b angMom_c angMom_d =
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match (angMom_b.tot, angMom_d.tot) with
| (_,0) -> if angMom_b.tot = 0 then
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begin
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match vrr_v 0 angMom_a angMom_c with
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| Some matrix -> Array.fold_left (fun accu c -> accu +. Array.fold_left (+.) 0. c) 0. matrix
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| None -> 0.
end
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else
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hrr0_v angMom_a angMom_b angMom_c
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| (_,_) ->
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let xyz = get_xyz angMom_d in
let cp = Powers.incr xyz angMom_c in
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let dm = Powers.decr xyz angMom_d in
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let h1 =
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hrr_v angMom_a angMom_b cp dm
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in
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let f = Coordinate.get xyz center_cd in
if abs_float f < cutoff then
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h1
else
let h2 =
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hrr_v angMom_a angMom_b angMom_c dm
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in h1 +. f *. h2
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in
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hrr_v angMom_a angMom_b angMom_c angMom_d
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let contracted_class_shell_pairs ~zero_m ?schwartz_p ?schwartz_q shell_p shell_q : float Zmap.t =
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let shell_a = shell_p.ContractedShellPair.shell_a
and shell_b = shell_p.ContractedShellPair.shell_b
and shell_c = shell_q.ContractedShellPair.shell_a
and shell_d = shell_q.ContractedShellPair.shell_b
and sp = shell_p.ContractedShellPair.shell_pairs
and sq = shell_q.ContractedShellPair.shell_pairs
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in
let maxm =
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shell_p.ContractedShellPair.totAngMomInt +
shell_q.ContractedShellPair.totAngMomInt
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in
(* Pre-computation of integral class indices *)
let class_indices =
Angular_momentum.zkey_array
(Angular_momentum.Quartet
Contracted_shell.(totAngMom shell_a, totAngMom shell_b,
totAngMom shell_c, totAngMom shell_d))
in
let contracted_class =
Array.make (Array.length class_indices) 0.;
in
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let monocentric =
shell_p.ContractedShellPair.monocentric &&
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shell_q.ContractedShellPair.monocentric &&
Contracted_shell.center shell_p.ContractedShellPair.shell_a =
Contracted_shell.center shell_q.ContractedShellPair.shell_a
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in
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(** Screening on the product of coefficients *)
let coef_max_p =
Array.fold_left (fun accu x ->
if (abs_float x) > accu then (abs_float x) else accu)
0. shell_p.ContractedShellPair.coef
and coef_max_q =
Array.fold_left (fun accu x ->
if (abs_float x) > accu then (abs_float x) else accu)
0. shell_q.ContractedShellPair.coef
in
let rec build_list cutoff vec accu = function
| -1 -> Array.of_list accu
| k -> build_list cutoff vec (
if (abs_float vec.(k) > cutoff) then (k::accu)
else accu ) (k-1)
in
let p_list =
let vec = shell_p.ContractedShellPair.coef in
build_list (cutoff /. coef_max_q) vec [] (Array.length vec - 1)
and q_list =
let vec = shell_q.ContractedShellPair.coef in
build_list (cutoff /. coef_max_p) vec [] (Array.length vec - 1)
in
let np, nq =
Array.length p_list,
Array.length q_list
in
let filter_p vec = Array.init np (fun k -> vec.(p_list.(k)))
and filter_q vec = Array.init nq (fun k -> vec.(q_list.(k)))
in
let sp = filter_p sp
and sq = filter_q sq
in
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(* Compute all integrals in the shell for each pair of significant shell pairs *)
begin
match Contracted_shell.(totAngMom shell_a, totAngMom shell_b,
totAngMom shell_c, totAngMom shell_d) with
| Angular_momentum.(S,S,S,S) ->
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contracted_class.(0) <-
begin
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try
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let expo_inv_p =
Vec.init np (fun ab -> sp.(ab-1).ShellPair.expo_inv)
and expo_inv_q =
Vec.init nq (fun cd -> sq.(cd-1).ShellPair.expo_inv)
in
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let coef =
let result = Mat.make0 nq np in
Lacaml.D.ger
(Vec.of_array @@ filter_q shell_q.ContractedShellPair.coef)
(Vec.of_array @@ filter_p shell_p.ContractedShellPair.coef)
result;
result
in
let zm_array = Mat.init_cols np nq (fun i j ->
try
if (abs_float coef.{j,i} ) < 1.e-3*.cutoff then
raise NullQuartet;
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let expo_pq_inv =
expo_inv_p.{i} +. expo_inv_q.{j}
in
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let center_pq =
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sp.(i-1).ShellPair.center |- sq.(j-1).ShellPair.center
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in
let norm_pq_sq =
Coordinate.dot center_pq center_pq
in
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let zero_m_array =
zero_m ~maxm:0 ~expo_pq_inv ~norm_pq_sq
in
zero_m_array.(0)
with NullQuartet -> 0.
) in
Mat.gemm_trace zm_array coef
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with (Invalid_argument _) -> 0.
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end
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| _ ->
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let coef =
let cp = filter_p shell_p.ContractedShellPair.coef
and cq = filter_q shell_q.ContractedShellPair.coef
in
Array.init np (fun l -> Array.init nq (fun k -> cq.(k) *. cp.(l)) )
in
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let expo_inv_p =
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Array.map (fun shell_ab -> shell_ab.ShellPair.expo_inv) sp
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and expo_inv_q =
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Array.map (fun shell_cd -> shell_cd.ShellPair.expo_inv) sq
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in
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let expo_b =
Array.map (fun shell_ab -> Contracted_shell.expo shell_b shell_ab.ShellPair.j) sp
and expo_d =
Array.map (fun shell_cd -> Contracted_shell.expo shell_d shell_cd.ShellPair.j) sq
in
let norm_coef_scale_p = shell_p.ContractedShellPair.norm_coef_scale in
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let center_pq =
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let result =
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Array.init 3 (fun xyz ->
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Array.init np (fun ab ->
let shell_ab = sp.(ab) in
Array.init nq (fun cd ->
let shell_cd = sq.(cd)
in
let cpq =
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shell_ab.ShellPair.center |- shell_cd.ShellPair.center
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in
match xyz with
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| 0 -> Coordinate.get X cpq;
| 1 -> Coordinate.get Y cpq;
| 2 -> Coordinate.get Z cpq;
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| _ -> assert false
)
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)
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)
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in function
| X -> result.(0)
| Y -> result.(1)
| Z -> result.(2)
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in
let zero_m_array =
let result =
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Array.init (maxm+1) (fun _ ->
Array.init np (fun _ -> Array.make nq 0. ) )
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in
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let empty = Array.make (maxm+1) 0. in
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Array.iteri (fun ab shell_ab ->
let zero_m_array_tmp =
Array.mapi (fun cd shell_cd ->
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if (abs_float coef.(ab).(cd) < cutoff) then
empty
else
let expo_pq_inv =
expo_inv_p.(ab) +. expo_inv_q.(cd)
in
let norm_pq_sq =
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let x = (center_pq X).(ab).(cd)
and y = (center_pq Y).(ab).(cd)
and z = (center_pq Z).(ab).(cd)
in
x *. x +. y *. y +. z *. z
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in
zero_m ~maxm ~expo_pq_inv ~norm_pq_sq
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) sq
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in
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(* Transpose result *)
for m=0 to maxm do
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for cd=0 to nq-1 do
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result.(m).(ab).(cd) <- zero_m_array_tmp.(cd).(m) *. coef.(ab).(cd)
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done
done
) sp;
result
in
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let norm =
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let norm_coef_scale_q =
shell_q.ContractedShellPair.norm_coef_scale
in
Array.to_list norm_coef_scale_p
|> List.map (fun v1 ->
Array.map (fun v2 -> v1 *. v2) norm_coef_scale_q)
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|> Array.concat
in
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let map_1d = Array.init (maxm+1) (fun _ -> Zmap.create (4*maxm))
and map_2d = Array.init (maxm+1) (fun _ -> Zmap.create (Array.length class_indices))
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in
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(* Compute the integral class from the primitive shell quartet *)
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Array.iteri (fun i key ->
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let (angMom_a,angMom_b,angMom_c,angMom_d) =
match Zkey.to_powers ~kind:Zkey.Kind_12 key with
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| Zkey.Twelve x -> x
| _ -> assert false
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in
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try
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if monocentric then
begin
if ( ((1 land angMom_a.x + angMom_b.x + angMom_c.x + angMom_d.x) =1) ||
((1 land angMom_a.y + angMom_b.y + angMom_c.y + angMom_d.y) =1) ||
((1 land angMom_a.z + angMom_b.z + angMom_c.z + angMom_d.z) =1)
) then
raise NullQuartet
end;
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(* Schwartz screening *)
if (np+nq> 24) then
(
let schwartz_p =
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let key = Zkey.of_powers (Zkey.Twelve
(angMom_a, angMom_b, angMom_a, angMom_b) )
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in
match schwartz_p with
| None -> 1.
| Some schwartz_p -> Zmap.find schwartz_p key
in
if schwartz_p < cutoff then raise NullQuartet;
let schwartz_q =
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let key = Zkey.of_powers (Zkey.Twelve
(angMom_c, angMom_d, angMom_c, angMom_d) )
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in
match schwartz_q with
| None -> 1.
| Some schwartz_q -> Zmap.find schwartz_q key
in
if schwartz_p *. schwartz_q < cutoff2 then raise NullQuartet;
);
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let integral =
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hvrr_two_e_vector (angMom_a, angMom_b, angMom_c, angMom_d)
zero_m_array
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(expo_b, expo_d)
(expo_inv_p, expo_inv_q)
(shell_p.ContractedShellPair.center_ab,
shell_q.ContractedShellPair.center_ab, center_pq)
map_1d map_2d np nq
in
contracted_class.(i) <- contracted_class.(i) +. integral *. norm.(i)
with NullQuartet -> ()
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) class_indices
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end;
let result =
Zmap.create (Array.length contracted_class)
in
Array.iteri (fun i key -> Zmap.add result key contracted_class.(i)) class_indices;
result
(** Computes all the two-electron integrals of the contracted shell quartet *)
let contracted_class ~zero_m shell_a shell_b shell_c shell_d : float Zmap.t =
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let shell_p = ContractedShellPair.create ~cutoff shell_a shell_b
and shell_q = ContractedShellPair.create ~cutoff shell_c shell_d
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in
contracted_class_shell_pairs ~zero_m shell_p shell_q