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QCaml/CI/F12CI.ml

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let debug s =
Printf.printf "%s\n%!" s;
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open Lacaml.D
type t =
{
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gamma : float;
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mo_basis : MOBasis.t ;
aux_basis : MOBasis.t ;
det_space : DeterminantSpace.t ;
ci : CI.t ;
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eigensystem : (Mat.t * Vec.t) lazy_t;
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}
let ci t = t.ci
let mo_basis t = t.mo_basis
let det_space t = t.det_space
let mo_class t = DeterminantSpace.mo_class @@ det_space t
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let eigensystem t = Lazy.force t.eigensystem
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let f12_integrals mo_basis =
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let two_e_ints = MOBasis.f12_ints mo_basis in
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( (fun i j _ -> 0.),
(fun i j k l s s' ->
if s' = Spin.other s then
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F12.get_phys two_e_ints i j k l
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else
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(F12.get_phys two_e_ints i j k l) -.
(F12.get_phys two_e_ints i j l k)
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) )
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let h_ij mo_basis ki kj =
let integrals =
List.map (fun f -> f mo_basis)
[ CI.h_integrals ]
in
CIMatrixElement.make integrals ki kj
|> List.hd
let f_ij mo_basis ki kj =
let integrals =
List.map (fun f -> f mo_basis)
[ f12_integrals ]
in
CIMatrixElement.make integrals ki kj
|> List.hd
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let is_internal det_space =
let m l =
List.fold_left (fun accu i ->
let j = i-1 in Z.(logor accu (shift_left one j))
) Z.zero l
in
let mo_class = DeterminantSpace.mo_class det_space in
let aux_mask = m (MOClass.auxiliary_mos mo_class) in
fun a ->
let alfa =
Determinant.alfa a
|> Spindeterminant.bitstring
in
if Z.logand aux_mask alfa <> Z.zero then
false
else
let beta =
Determinant.beta a
|> Spindeterminant.bitstring
in
Z.logand aux_mask beta = Z.zero
let dressing_vector aux_basis f12_amplitudes ci =
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debug "Computing dressing vector";
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(*
let i_o1_alfa = h_ij aux_basis in
let alfa_o2_i = f_ij aux_basis in
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let w_alfa _ _ = 1. in
let mo_class = CI.mo_class ci in
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let list_holes = List.concat
[ MOClass.inactive_mos mo_class ; MOClass.active_mos mo_class ]
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and list_particles2 = MOClass.auxiliary_mos mo_class
and list_particles1 = List.concat
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[ MOClass.active_mos mo_class ; MOClass.virtual_mos mo_class ; MOClass.auxiliary_mos mo_class ]
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in
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(*
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Util.debug_matrix "f12 amplitudes" f12_amplitudes;
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*)
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(* Single state here *)
let result =
CI.second_order_sum ci list_holes list_particles1 list_holes list_particles2
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(is_internal ci.det_space) i_o1_alfa alfa_o2_i w_alfa f12_amplitudes ~unique:false
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|> Vec.of_list
in
Matrix.sparse_of_vector_array [| Vector.sparse_of_vec result |]
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*)
let out_dets =
DeterminantSpace.fci_of_mo_basis ~frozen_core:false aux_basis
|> DeterminantSpace.determinants_array
|> Array.to_list
|> List.filter (fun i -> not (is_internal ci.CI.det_space i))
|> Array.of_list
in
let in_dets =
DeterminantSpace.determinants_array ci.CI.det_space
in
let m_H_aux =
Array.map (fun ki ->
Array.map (fun kj ->
h_ij aux_basis ki kj
) out_dets
) in_dets
|> Mat.of_array
in
let m_F_aux =
Array.map (fun ki ->
Array.map (fun kj ->
f_ij aux_basis ki kj
) out_dets
) in_dets
|> Mat.of_array
in
let m_HF =
gemm m_H_aux m_F_aux ~transb:`T
in
gemm m_HF f12_amplitudes
|> Matrix.sparse_of_mat
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let make ~simulation ?(threshold=1.e-12) ?(frozen_core=true) ~mo_basis ~aux_basis_filename () =
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let gamma = 1.0 in
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let mo_num = MOBasis.size mo_basis in
(* Add auxiliary basis set *)
let s =
let charge = Charge.to_int @@ Simulation.charge simulation
and multiplicity = Electrons.multiplicity @@ Simulation.electrons simulation
and nuclei = Simulation.nuclei simulation
in
let general_basis =
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Basis.general_basis @@ Simulation.basis simulation
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in
GeneralBasis.combine [
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general_basis ; GeneralBasis.read aux_basis_filename
]
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|> Basis.of_nuclei_and_general_basis nuclei
|> Simulation.make ~charge ~multiplicity ~nuclei
in
let aux_basis =
MOBasis.of_mo_basis s mo_basis
in
let det_space =
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DeterminantSpace.fci_f12_of_mo_basis aux_basis ~frozen_core mo_num
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in
let ci = CI.make det_space in
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let ci_coef, ci_energy =
let x = Lazy.force ci.eigensystem in
Parallel.broadcast (lazy x)
in
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let f12_amplitudes =
(* While in a sequential region, initiate the parallel
4-idx transformation to avoid nested parallel jobs
*)
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debug "Four-idx transform of f12 intergals";
ignore @@ MOBasis.f12_ints aux_basis;
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let f = fun ki kj ->
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if ki <> kj then
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gamma *. (f_ij aux_basis ki kj)
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else
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1. +. gamma *. (f_ij aux_basis ki kj)
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in
let m_F =
CI.create_matrix_spin f det_space
|> Lazy.force
in
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fun ci_coef ->
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(*
Util.debug_matrix "F" (Matrix.to_mat m_F);
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debug "Solving linear system";
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*)
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Matrix.ax_eq_b m_F (Matrix.dense_of_mat ci_coef)
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|> Matrix.to_mat
in
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let e_shift =
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let det =
DeterminantSpace.determinant_stream det_space
|> Stream.next
in
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h_ij aux_basis det det
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in
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let eigensystem = lazy (
let m_H =
Lazy.force ci.CI.m_H
in
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(*
Util.debug_matrix "H" (Matrix.to_mat m_H);
*)
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let rec iteration ?(state=1) psi =
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debug "Iteration";
let delta =
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dressing_vector aux_basis (f12_amplitudes psi) ci
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in
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let f = 1.0 /. psi.{1,1} in
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let delta_00 =
Util.list_range 2 (Mat.dim1 psi)
|> List.fold_left (fun accu i -> accu +.
(Matrix.get delta i 1) *. psi.{i,1} *. f) 0.
in
let delta = Matrix.to_mat delta in
delta.{1,1} <- delta.{1,1} -. delta_00;
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(*------
TODO SINGLE STATE HERE
*)
let n_states = ci.CI.n_states in
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let diagonal =
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Vec.init (Matrix.dim1 m_H) (fun i ->
if i = 1 then
Matrix.get m_H i i +. delta.{1,1} *. f
else
Matrix.get m_H i i
)
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in
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let matrix_prod c =
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let w =
Matrix.mm ~transa:`T m_H c
|> Matrix.to_mat
in
let c11 = Matrix.get c 1 1 in
Util.list_range 1 (Mat.dim1 w)
|> List.iter (fun i ->
let dci =
delta.{i,1} *. f ;
in
w.{i,1} <- w.{i,1} +. dci *. c11;
if (i <> 1) then
w.{1,1} <- w.{1,1} +. dci *. (Matrix.get c i 1);
);
Matrix.dense_of_mat w
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in
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let eigenvectors, eigenvalues =
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Davidson.make ~threshold:1.e-6 ~guess:psi ~n_states diagonal matrix_prod
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in
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let conv =
1.0 -. abs_float ( dot
(Mat.to_col_vecs psi).(0)
(Mat.to_col_vecs eigenvectors).(0) )
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in
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Printf.printf "Convergence : %e %f\n" conv (eigenvalues.{1} +. e_shift);
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if conv > threshold then
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iteration eigenvectors
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else
let eigenvalues =
Vec.map (fun x -> x +. e_shift) eigenvalues
in
eigenvectors, eigenvalues
in
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iteration ci_coef
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)
in
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{ mo_basis ; aux_basis ; det_space ; ci ; eigensystem ; gamma }
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